Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm23596-201ENSMUST00000104304 132 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm15207-201ENSMUST00000119259 442 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm38314-201ENSMUST00000195709 625 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Gm43002-201ENSMUST00000200310 155 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 AU022133-201ENSMUST00000200601 873 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a2Q9JLR1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm12857-201ENSMUST00000117678 592 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm11663-201ENSMUST00000117888 290 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm12266-201ENSMUST00000120311 962 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm26047-201ENSMUST00000157308 113 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm4310-201ENSMUST00000177847 889 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm3332-201ENSMUST00000189337 928 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm26047-202ENSMUST00000198840 115 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm19208-201ENSMUST00000213861 912 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gm5369-201ENSMUST00000217499 588 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Btrc-209ENSMUST00000224478 2194 ntBASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sec61a2Q9JLR1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a2Q9JLR1 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms