Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Gm8601-201ENSMUST00000182096 909 ntBASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Gm27440-201ENSMUST00000184785 107 ntBASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1fQ9JIS7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm15707-201ENSMUST00000118804 996 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm25604-201ENSMUST00000158359 133 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm8170-201ENSMUST00000218581 945 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm13171-201ENSMUST00000117233 391 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1fQ9JIS7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm8019-201ENSMUST00000119317 587 ntBASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm16288-201ENSMUST00000137940 367 ntBASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm25677-201ENSMUST00000174983 72 ntBASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm25872-201ENSMUST00000177784 100 ntBASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cacna1fQ9JIS7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms