Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm19246-201ENSMUST00000173599 255 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Mir6998-201ENSMUST00000183343 64 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm45219-201ENSMUST00000205602 465 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm18561-201ENSMUST00000206027 804 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Erich3-203ENSMUST00000189969 3460 ntBASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ube3bQ9ES34 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm22923-201ENSMUST00000174952 110 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm43058-201ENSMUST00000197645 625 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm19009-201ENSMUST00000223072 823 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.61□□□□□ -0.23
Ube3bQ9ES34 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ube3bQ9ES34 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Gm15744-201ENSMUST00000161734 213 ntBASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Gm44323-201ENSMUST00000198689 129 ntBASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Gm7600-201ENSMUST00000209657 785 ntBASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Mt1-202ENSMUST00000211807 1085 ntBASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ube3bQ9ES34 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms