Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm23931-201ENSMUST00000103842 109 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm15004-201ENSMUST00000119192 630 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm11425-201ENSMUST00000119608 498 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm5070-201ENSMUST00000177599 862 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm18065-201ENSMUST00000221395 526 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm9396-201ENSMUST00000076703 567 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm15370-201ENSMUST00000117158 253 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm38002-201ENSMUST00000193255 180 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gzmn-202ENSMUST00000225535 989 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm5455-201ENSMUST00000058710 715 ntBASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Chaf1bQ9D0N7 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chaf1bQ9D0N7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.67□□□□□ -0.7
Chaf1bQ9D0N7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.67□□□□□ -0.7
Chaf1bQ9D0N7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms