Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Snf8Q9CZ28 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm24255-201ENSMUST00000104481 128 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm13296-201ENSMUST00000117854 997 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm43184-201ENSMUST00000197247 542 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm43758-201ENSMUST00000199500 367 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Snf8Q9CZ28 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Gm11509-201ENSMUST00000117358 325 ntBASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Gm15207-201ENSMUST00000119259 442 ntBASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Gm20495-201ENSMUST00000173902 235 ntBASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Snf8Q9CZ28 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms