Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm22133-201ENSMUST00000102082 109 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm11509-201ENSMUST00000117358 325 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm14906-201ENSMUST00000119265 390 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm15782-201ENSMUST00000121073 445 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm9550-201ENSMUST00000161130 862 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 AY036118-201ENSMUST00000200021 923 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm44422-201ENSMUST00000204142 1025 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.99□□□□□ -0.49
Retreg3Q9CQV4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm12584-201ENSMUST00000117109 1105 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm12697-201ENSMUST00000118008 667 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm17046-201ENSMUST00000168078 850 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Cfhr3-201ENSMUST00000170441 1022 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm9192-201ENSMUST00000183221 985 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm29615-201ENSMUST00000185371 697 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm28224-201ENSMUST00000186078 697 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm29001-201ENSMUST00000186177 697 ntBASIC11.98□□□□□ -0.49
Retreg3Q9CQV4 Gm28292-201ENSMUST00000186593 697 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms