Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm23699-201ENSMUST00000158835 135 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm7741-201ENSMUST00000181445 989 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Mir7686-201ENSMUST00000200604 57 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm9555-201ENSMUST00000200908 583 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Gm2517-201ENSMUST00000215651 348 ntBASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpa3Q9CQ71 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm22711-201ENSMUST00000116890 133 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm15432-201ENSMUST00000121106 195 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 B9d1os-201ENSMUST00000137010 674 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm22144-201ENSMUST00000157402 102 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm7504-201ENSMUST00000201449 424 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm5996-201ENSMUST00000211110 718 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm6722-201ENSMUST00000221586 390 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms