Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdk5rap3Q99LM2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdk5rap3Q99LM2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12857-201ENSMUST00000117678 592 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm25890-201ENSMUST00000177643 165 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm22614-201ENSMUST00000178300 165 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm3332-201ENSMUST00000189337 928 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm45433-201ENSMUST00000209386 247 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm22042-201ENSMUST00000082989 165 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm26110-201ENSMUST00000083971 165 ntBASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk5rap3Q99LM2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm11663-201ENSMUST00000117888 290 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm7150-201ENSMUST00000122032 981 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm4978-201ENSMUST00000071565 801 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdk5rap3Q99LM2 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms