Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clp1Q99LI9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clp1Q99LI9 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clp1Q99LI9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm22937-201ENSMUST00000103954 131 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Olfml3-204ENSMUST00000169286 874 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm19246-201ENSMUST00000173599 255 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm5449-201ENSMUST00000081132 357 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Gm25580-201ENSMUST00000083409 327 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clp1Q99LI9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.08□□□□□ -0.48
Clp1Q99LI9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clp1Q99LI9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm23745-201ENSMUST00000104230 125 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm25998-201ENSMUST00000175397 53 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm31274-201ENSMUST00000197356 229 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm43547-201ENSMUST00000197729 328 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 BC080696-201ENSMUST00000202858 1218 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.07□□□□□ -0.48
Clp1Q99LI9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.07□□□□□ -0.48
Clp1Q99LI9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms