Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm45575-201ENSMUST00000210283 548 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm6867-201ENSMUST00000219165 425 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm25881-201ENSMUST00000157783 103 ntBASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.04□□□□□ -0.64
Cstf3Q99LI7 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cstf3Q99LI7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gm8100-201ENSMUST00000182906 988 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms