Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm18734-201ENSMUST00000172937 808 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm2553-201ENSMUST00000215986 605 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm21811-201ENSMUST00000096485 930 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Usp11Q99K46 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm14724-201ENSMUST00000118400 537 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm8566-201ENSMUST00000120174 465 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Mir7070-201ENSMUST00000183657 86 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm28686-201ENSMUST00000187404 609 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.03□□□□□ -0.48
Usp11Q99K46 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp11Q99K46 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp11Q99K46 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Usp11Q99K46 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Usp11Q99K46 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.02□□□□□ -0.48
Usp11Q99K46 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.02□□□□□ -0.48
Usp11Q99K46 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Usp11Q99K46 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp11Q99K46 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm12501-201ENSMUST00000119163 529 ntBASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm11450-201ENSMUST00000121144 333 ntBASIC12.02□□□□□ -0.49
Usp11Q99K46 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm9192-201ENSMUST00000183221 985 ntBASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm27530-201ENSMUST00000184096 98 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms