Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm9192-201ENSMUST00000183221 985 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm44364-201ENSMUST00000198368 141 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdk9Q99J95 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.5□□□□□ -0.57
Cdk9Q99J95 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Rims2-204ENSMUST00000226410 3685 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gm6334-201ENSMUST00000207083 228 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.49□□□□□ -0.57
Cdk9Q99J95 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdk9Q99J95 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms