Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trex1Q91XB0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trex1Q91XB0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm25562-201ENSMUST00000104608 133 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Snord23-201ENSMUST00000116828 109 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm12663-201ENSMUST00000118481 958 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm5257-201ENSMUST00000121823 790 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm5621-201ENSMUST00000187303 640 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm45500-201ENSMUST00000211676 803 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.04□□□□□ -0.32
Trex1Q91XB0 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.04□□□□□ -0.32
Trex1Q91XB0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm43002-201ENSMUST00000200310 155 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm9353-201ENSMUST00000200472 604 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Capsl-202ENSMUST00000226688 739 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trex1Q91XB0 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.03□□□□□ -0.32
Trex1Q91XB0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trex1Q91XB0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms