Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm4978-201ENSMUST00000071565 801 ntBASIC9.57□□□□□ -0.88
H1fooQ8VIK3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm14277-201ENSMUST00000121195 360 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm16505-201ENSMUST00000179981 232 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm2260-201ENSMUST00000184965 657 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm44008-201ENSMUST00000204345 412 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm45186-201ENSMUST00000206874 478 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 AC073947.1-201ENSMUST00000216991 649 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Gm21811-201ENSMUST00000096485 930 ntBASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
H1fooQ8VIK3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms