Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TraipQ8VIG6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Atxn7l1os1-201ENSMUST00000155877 1836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm25148-201ENSMUST00000104611 123 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm10169-201ENSMUST00000121822 348 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm23694-201ENSMUST00000179335 110 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 AC134913.1-201ENSMUST00000224563 504 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.3□□□□□ -0.44
TraipQ8VIG6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TraipQ8VIG6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm6461-201ENSMUST00000120015 633 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Mir6407-201ENSMUST00000184510 101 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm42816-201ENSMUST00000198433 325 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm19091-201ENSMUST00000208120 978 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm30671-201ENSMUST00000214898 318 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.29□□□□□ -0.44
TraipQ8VIG6 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TraipQ8VIG6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms