Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Nln-205ENSMUST00000224945 2486 ntBASIC11.06□□□□□ -0.64
Pcdh18Q8VHR0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm15953-201ENSMUST00000117656 1732 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm12241-201ENSMUST00000118330 726 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm11222-201ENSMUST00000119005 738 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm15547-201ENSMUST00000122152 333 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm45331-201ENSMUST00000209868 554 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm44798-201ENSMUST00000208123 2410 ntBASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh18Q8VHR0 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Gm16387-201ENSMUST00000180990 2632 ntBASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.04□□□□□ -0.64
Pcdh18Q8VHR0 Gm19994-201ENSMUST00000217086 586 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms