Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rprd1aQ8VDS4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm11244-201ENSMUST00000121243 237 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rprd1aQ8VDS4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rprd1aQ8VDS4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Gm11246-201ENSMUST00000120880 345 ntBASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Gm6485-201ENSMUST00000160676 439 ntBASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.77□□□□□ -0.53
Rprd1aQ8VDS4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms