Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Top1mtQ8R4U6 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm13045-201ENSMUST00000119019 712 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm11244-201ENSMUST00000121243 237 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Top1mtQ8R4U6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Mir5120-201ENSMUST00000175020 78 ntBASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Mir7686-201ENSMUST00000200604 57 ntBASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Top1mtQ8R4U6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms