Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.52□□□□□ -0.57
Clip4Q8CI96 Spcs1-203ENSMUST00000226374 592 ntBASIC11.52□□□□□ -0.57
Clip4Q8CI96 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Gm10288-201ENSMUST00000084614 537 ntBASIC11.52□□□□□ -0.57
Clip4Q8CI96 Rgr-203ENSMUST00000225070 4704 ntBASIC11.52□□□□□ -0.57
Clip4Q8CI96 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.52□□□□□ -0.57
Clip4Q8CI96 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Btrc-209ENSMUST00000224478 2194 ntBASIC11.52□□□□□ -0.57
Clip4Q8CI96 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.52□□□□□ -0.57
Clip4Q8CI96 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm7851-201ENSMUST00000117574 323 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm23699-201ENSMUST00000158835 135 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.51□□□□□ -0.57
Clip4Q8CI96 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clip4Q8CI96 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.5□□□□□ -0.57
Clip4Q8CI96 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm20426-201ENSMUST00000173657 440 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clip4Q8CI96 Gm2553-201ENSMUST00000215986 605 ntBASIC11.5□□□□□ -0.57
Clip4Q8CI96 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms