Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.07□□□□□ -0.16
Smc5Q8CG46 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.07□□□□□ -0.16
Smc5Q8CG46 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.07□□□□□ -0.16
Smc5Q8CG46 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm22846-201ENSMUST00000157706 270 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm17376-201ENSMUST00000166016 84 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm44364-201ENSMUST00000198368 141 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm7783-201ENSMUST00000204795 781 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.06□□□□□ -0.16
Smc5Q8CG46 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Smc5Q8CG46 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm12196-201ENSMUST00000120954 262 ntBASIC14.05□□□□□ -0.16
Smc5Q8CG46 Mir1896-201ENSMUST00000122641 81 ntBASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm2965-201ENSMUST00000198365 343 ntBASIC14.05□□□□□ -0.16
Smc5Q8CG46 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms