Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm12463-201ENSMUST00000118271 849 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm11660-201ENSMUST00000120955 412 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm3329-201ENSMUST00000159873 556 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm2553-201ENSMUST00000215986 605 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc87Q8CDL9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm28937-201ENSMUST00000185413 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm29400-201ENSMUST00000187208 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm28450-201ENSMUST00000187349 638 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm28662-201ENSMUST00000188446 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm28251-201ENSMUST00000188835 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm37318-201ENSMUST00000194325 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm38017-201ENSMUST00000194768 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm37287-201ENSMUST00000195449 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm37793-201ENSMUST00000195548 695 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 AY036118-201ENSMUST00000200021 923 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Rps4l-202ENSMUST00000204242 789 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm19208-201ENSMUST00000213861 912 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm5455-201ENSMUST00000058710 715 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms