Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Lysmd4Q8CC84 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Mir1896-201ENSMUST00000122641 81 ntBASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gm31256-201ENSMUST00000194705 506 ntBASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Gm9823-201ENSMUST00000051212 327 ntBASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Lysmd4Q8CC84 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Lysmd4Q8CC84 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm8343-201ENSMUST00000182705 994 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm9797-202ENSMUST00000218003 294 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms