Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm21939-201ENSMUST00000221137 2773 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Gm25148-201ENSMUST00000104611 123 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm8111-201ENSMUST00000117659 987 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Gm15615-201ENSMUST00000118876 198 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Gm14585-201ENSMUST00000120713 634 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Uba3Q8C878 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Gm44315-201ENSMUST00000203041 219 ntBASIC12□□□□□ -0.49
Uba3Q8C878 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Gm23105-201ENSMUST00000083719 134 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Gm10702-201ENSMUST00000098929 1268 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12□□□□□ -0.49
Uba3Q8C878 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12□□□□□ -0.49
Uba3Q8C878 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Uba3Q8C878 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm25076-201ENSMUST00000104098 132 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.99□□□□□ -0.49
Uba3Q8C878 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Olfml3-204ENSMUST00000169286 874 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm21092-201ENSMUST00000178995 955 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm10731-201ENSMUST00000181171 448 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm45856-201ENSMUST00000212752 416 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Uba3Q8C878 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Uba3Q8C878 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.99□□□□□ -0.49
Uba3Q8C878 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Uba3Q8C878 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Uba3Q8C878 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.98□□□□□ -0.49
Uba3Q8C878 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Uba3Q8C878 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Uba3Q8C878 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.98□□□□□ -0.49
Uba3Q8C878 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.98□□□□□ -0.49
Uba3Q8C878 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms