Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpp38Q80UU2 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm8302-201ENSMUST00000119217 852 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm15432-201ENSMUST00000121106 195 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 B9d1os-201ENSMUST00000137010 674 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm43058-201ENSMUST00000197645 625 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm43378-201ENSMUST00000199336 582 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rpp38Q80UU2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rpp38Q80UU2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Snord17-201ENSMUST00000104526 238 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms