Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Gm42480-201ENSMUST00000198434 2595 ntBASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 AC116797.2-202ENSMUST00000223587 1017 ntBASIC17.31■□□□□ 0.36
Slx4Q6P1D7 CT030035.1-201ENSMUST00000223964 935 ntBASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slx4Q6P1D7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Gm43727-201ENSMUST00000198021 2647 ntBASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Gm5764-201ENSMUST00000118817 885 ntBASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Gm5738-201ENSMUST00000206016 779 ntBASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 AC129217.1-201ENSMUST00000225181 642 ntBASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slx4Q6P1D7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 AC154461.1-201ENSMUST00000224207 1005 ntBASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Gm42815-201ENSMUST00000198787 1470 ntBASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slx4Q6P1D7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Mir1893-201ENSMUST00000122565 83 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm9574-201ENSMUST00000173127 845 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm44420-201ENSMUST00000203669 490 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm10020-201ENSMUST00000081993 612 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm6560-201ENSMUST00000198588 1591 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm44153-201ENSMUST00000204162 1580 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms