Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VcanQ62059 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC10.39□□□□□ -0.75
VcanQ62059 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VcanQ62059 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 AC151971.6-201ENSMUST00000216193 866 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Gm11951-201ENSMUST00000116005 431 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm14153-201ENSMUST00000119923 1139 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm12254-201ENSMUST00000134617 471 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC10.38□□□□□ -0.75
VcanQ62059 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.38□□□□□ -0.75
VcanQ62059 Gm8960-201ENSMUST00000219787 788 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.38□□□□□ -0.75
VcanQ62059 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
VcanQ62059 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
VcanQ62059 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm12377-201ENSMUST00000118656 252 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm16165-201ENSMUST00000160140 795 ntBASIC10.38□□□□□ -0.75
VcanQ62059 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.38□□□□□ -0.75
VcanQ62059 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC10.38□□□□□ -0.75
VcanQ62059 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.38□□□□□ -0.75
VcanQ62059 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VcanQ62059 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC10.38□□□□□ -0.75
VcanQ62059 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
VcanQ62059 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Gm8661-201ENSMUST00000118688 992 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.37□□□□□ -0.75
VcanQ62059 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.37□□□□□ -0.75
VcanQ62059 Gm9353-201ENSMUST00000200472 604 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.37□□□□□ -0.75
VcanQ62059 AC114585.2-201ENSMUST00000227693 486 ntBASIC10.37□□□□□ -0.75
VcanQ62059 AC123061.1-201ENSMUST00000228021 999 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.37□□□□□ -0.75
VcanQ62059 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VcanQ62059 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
VcanQ62059 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VcanQ62059 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VcanQ62059 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms