Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.96□□□□□ -0.66
Col12a1Q60847 Gm18065-201ENSMUST00000221395 526 ntBASIC10.96□□□□□ -0.66
Col12a1Q60847 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Col12a1Q60847 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.96□□□□□ -0.66
Col12a1Q60847 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Col12a1Q60847 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Col12a1Q60847 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col12a1Q60847 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm28746-201ENSMUST00000187453 380 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Col12a1Q60847 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm13002-201ENSMUST00000119286 682 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm14153-201ENSMUST00000119923 1139 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm15793-201ENSMUST00000121857 495 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Gm16184-201ENSMUST00000162324 573 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 AC151971.6-201ENSMUST00000216193 866 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.95□□□□□ -0.66
Col12a1Q60847 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col12a1Q60847 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col12a1Q60847 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.94□□□□□ -0.66
Col12a1Q60847 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC10.94□□□□□ -0.66
Col12a1Q60847 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC10.94□□□□□ -0.66
Col12a1Q60847 AC124772.3-201ENSMUST00000222535 575 ntBASIC10.94□□□□□ -0.66
Col12a1Q60847 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC10.94□□□□□ -0.66
Col12a1Q60847 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm22994-201ENSMUST00000175422 82 ntBASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.94□□□□□ -0.66
Col12a1Q60847 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 AC123061.1-201ENSMUST00000228021 999 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms