Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm16219-201ENSMUST00000120096 274 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm13937-201ENSMUST00000121000 988 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Mir1956-201ENSMUST00000157748 65 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm43163-201ENSMUST00000196571 442 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm10263-201ENSMUST00000085163 300 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps54Q5SPW0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm17877-201ENSMUST00000192578 814 ntBASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm44158-201ENSMUST00000203881 505 ntBASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Vps54Q5SPW0 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.65□□□□□ -0.22
Vps54Q5SPW0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm26013-201ENSMUST00000104404 119 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms