Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm13916-201ENSMUST00000117368 628 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm37246-201ENSMUST00000192665 835 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm43378-201ENSMUST00000199336 582 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm5369-201ENSMUST00000217499 588 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm7940-201ENSMUST00000218195 769 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Syne3Q4FZC9 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm9062-201ENSMUST00000117712 727 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm13809-201ENSMUST00000117921 597 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm12566-201ENSMUST00000121479 359 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Spcs1-203ENSMUST00000226374 592 ntBASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Syne3Q4FZC9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms