Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm6114-201ENSMUST00000182472 968 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm17799-201ENSMUST00000183270 667 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm24161-201ENSMUST00000104592 130 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm13758-201ENSMUST00000118699 743 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm4866-201ENSMUST00000197408 589 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Spg11Q3UHA3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Gm15132-201ENSMUST00000118581 652 ntBASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms