Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm15615-201ENSMUST00000118876 198 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm12516-201ENSMUST00000120819 385 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm7504-201ENSMUST00000201449 424 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.01□□□□□ -0.49
Cntn3Q07409 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn3Q07409 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn3Q07409 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm12247-201ENSMUST00000117585 670 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12□□□□□ -0.49
Cntn3Q07409 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12□□□□□ -0.49
Cntn3Q07409 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm7741-201ENSMUST00000181445 989 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Gm44329-201ENSMUST00000197469 112 ntBASIC12□□□□□ -0.49
Cntn3Q07409 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12□□□□□ -0.49
Cntn3Q07409 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm2875-201ENSMUST00000211333 360 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12□□□□□ -0.49
Cntn3Q07409 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12□□□□□ -0.49
Cntn3Q07409 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cntn3Q07409 Gm38292-201ENSMUST00000192646 3045 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm38194-201ENSMUST00000194529 2211 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cntn3Q07409 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cntn3Q07409 Gm45532-201ENSMUST00000210342 3620 ntBASIC12□□□□□ -0.49
Cntn3Q07409 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn3Q07409 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cntn3Q07409 Gm43242-201ENSMUST00000199507 1776 ntBASIC12□□□□□ -0.49
Cntn3Q07409 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cntn3Q07409 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.99□□□□□ -0.49
Cntn3Q07409 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.99□□□□□ -0.49
Cntn3Q07409 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cntn3Q07409 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.99□□□□□ -0.49
Cntn3Q07409 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn3Q07409 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.99□□□□□ -0.49
Cntn3Q07409 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.99□□□□□ -0.49
Cntn3Q07409 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms