Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm10263-201ENSMUST00000085163 300 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm24231-201ENSMUST00000104315 133 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm12460-201ENSMUST00000117147 357 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm15615-201ENSMUST00000118876 198 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm23119-201ENSMUST00000158610 140 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm24551-201ENSMUST00000158645 92 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm23777-201ENSMUST00000158994 259 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm28356-202ENSMUST00000187566 858 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm38333-201ENSMUST00000193608 604 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm17937-201ENSMUST00000197908 742 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm5291-201ENSMUST00000201965 899 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm3379-201ENSMUST00000222259 642 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm5564-201ENSMUST00000034916 967 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Olfr584-201ENSMUST00000098210 964 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col9a1Q05722 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.66□□□□□ -0.54
Col9a1Q05722 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
Col9a1Q05722 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col9a1Q05722 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm14735-201ENSMUST00000121772 3088 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms