Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.59□□□□□ -0.71
Cacna1aP97445 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm12389-201ENSMUST00000117696 418 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm14270-201ENSMUST00000118388 846 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm16030-201ENSMUST00000159098 603 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Cacna1aP97445 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cacna1aP97445 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm13445-201ENSMUST00000121664 307 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm17936-201ENSMUST00000199413 988 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm44216-201ENSMUST00000203942 157 ntBASIC10.59□□□□□ -0.71
Cacna1aP97445 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.59□□□□□ -0.71
Cacna1aP97445 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cacna1aP97445 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Cacna1aP97445 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cacna1aP97445 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm14071-201ENSMUST00000117817 509 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm43249-201ENSMUST00000200464 458 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm2448-201ENSMUST00000207080 559 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm4294-201ENSMUST00000105169 614 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm15528-201ENSMUST00000117821 864 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm13094-201ENSMUST00000117930 409 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Mir8093-201ENSMUST00000185043 137 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.58□□□□□ -0.72
Cacna1aP97445 Gm18035-201ENSMUST00000211962 589 ntBASIC10.58□□□□□ -0.72
Cacna1aP97445 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cacna1aP97445 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms