Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.84□□□□□ -0.51
Vps45P97390 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vps45P97390 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps45P97390 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.84□□□□□ -0.51
Vps45P97390 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vps45P97390 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Gm13916-201ENSMUST00000117368 628 ntBASIC11.84□□□□□ -0.51
Vps45P97390 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps45P97390 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps45P97390 Gm26047-201ENSMUST00000157308 113 ntBASIC11.84□□□□□ -0.51
Vps45P97390 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.84□□□□□ -0.51
Vps45P97390 Gm10807-201ENSMUST00000177134 795 ntBASIC11.84□□□□□ -0.51
Vps45P97390 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.84□□□□□ -0.51
Vps45P97390 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.84□□□□□ -0.51
Vps45P97390 Gm26047-202ENSMUST00000198840 115 ntBASIC11.84□□□□□ -0.51
Vps45P97390 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.84□□□□□ -0.51
Vps45P97390 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Vps45P97390 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Vps45P97390 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Vps45P97390 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps45P97390 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps45P97390 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps45P97390 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vps45P97390 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vps45P97390 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Vps45P97390 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.83□□□□□ -0.52
Vps45P97390 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 Gm8731-201ENSMUST00000118088 412 ntBASIC11.83□□□□□ -0.52
Vps45P97390 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Vps45P97390 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.83□□□□□ -0.52
Vps45P97390 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.83□□□□□ -0.52
Vps45P97390 Gm2875-201ENSMUST00000211333 360 ntBASIC11.83□□□□□ -0.52
Vps45P97390 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Gm4978-201ENSMUST00000071565 801 ntBASIC11.83□□□□□ -0.52
Vps45P97390 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.83□□□□□ -0.52
Vps45P97390 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Vps45P97390 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.83□□□□□ -0.52
Vps45P97390 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vps45P97390 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps45P97390 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps45P97390 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps45P97390 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Vps45P97390 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.82□□□□□ -0.52
Vps45P97390 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps45P97390 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms