Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.24□□□□□ -0.61
Shox2P70390 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shox2P70390 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.23□□□□□ -0.61
Shox2P70390 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Gm7488-201ENSMUST00000117148 684 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Gm18018-201ENSMUST00000198273 408 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gm5302-201ENSMUST00000202130 796 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Gm4607-201ENSMUST00000206649 577 ntBASIC11.23□□□□□ -0.61
Shox2P70390 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.23□□□□□ -0.61
Shox2P70390 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.23□□□□□ -0.61
Shox2P70390 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.23□□□□□ -0.61
Shox2P70390 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Shox2P70390 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Shox2P70390 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shox2P70390 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.23□□□□□ -0.61
Shox2P70390 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Gm14127-201ENSMUST00000117906 678 ntBASIC11.22□□□□□ -0.61
Shox2P70390 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.22□□□□□ -0.61
Shox2P70390 Gm11511-201ENSMUST00000118146 540 ntBASIC11.22□□□□□ -0.61
Shox2P70390 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Gm24074-201ENSMUST00000158178 260 ntBASIC11.22□□□□□ -0.61
Shox2P70390 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.22□□□□□ -0.61
Shox2P70390 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.22□□□□□ -0.61
Shox2P70390 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shox2P70390 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.22□□□□□ -0.61
Shox2P70390 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.22□□□□□ -0.61
Shox2P70390 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shox2P70390 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shox2P70390 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.22□□□□□ -0.61
Shox2P70390 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms