Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 AC155300.1-201ENSMUST00000219134 480 ntBASIC18.36■□□□□ 0.53
Cux2P70298 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC18.36■□□□□ 0.53
Cux2P70298 AC159006.3-201ENSMUST00000226918 664 ntBASIC18.36■□□□□ 0.53
Cux2P70298 AC107711.3-201ENSMUST00000228939 1035 ntBASIC18.36■□□□□ 0.53
Cux2P70298 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cux2P70298 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cux2P70298 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 Gm37582-201ENSMUST00000192953 1409 ntBASIC18.36■□□□□ 0.53
Cux2P70298 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cux2P70298 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cux2P70298 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.35■□□□□ 0.53
Cux2P70298 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 AC154197.1-201ENSMUST00000225136 1382 ntBASIC18.35■□□□□ 0.53
Cux2P70298 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Gm14571-201ENSMUST00000118292 570 ntBASIC18.35■□□□□ 0.53
Cux2P70298 Gm6276-201ENSMUST00000120159 579 ntBASIC18.35■□□□□ 0.53
Cux2P70298 Gm12254-201ENSMUST00000134617 471 ntBASIC18.35■□□□□ 0.53
Cux2P70298 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC18.35■□□□□ 0.53
Cux2P70298 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC18.35■□□□□ 0.53
Cux2P70298 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cux2P70298 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Cux2P70298 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cux2P70298 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cux2P70298 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Cux2P70298 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC18.35■□□□□ 0.53
Cux2P70298 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC18.34■□□□□ 0.53
Cux2P70298 Gm15793-201ENSMUST00000121857 495 ntBASIC18.34■□□□□ 0.53
Cux2P70298 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC18.34■□□□□ 0.53
Cux2P70298 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 AC165260.2-201ENSMUST00000225371 395 ntBASIC18.34■□□□□ 0.53
Cux2P70298 AC102327.1-201ENSMUST00000226389 742 ntBASIC18.34■□□□□ 0.53
Cux2P70298 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC18.34■□□□□ 0.53
Cux2P70298 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cux2P70298 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cux2P70298 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC18.34■□□□□ 0.53
Cux2P70298 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Cux2P70298 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC18.33■□□□□ 0.53
Cux2P70298 Mir705-201ENSMUST00000102058 82 ntBASIC18.33■□□□□ 0.53
Cux2P70298 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Gm27675-201ENSMUST00000184527 94 ntBASIC18.33■□□□□ 0.53
Cux2P70298 Gm36980-201ENSMUST00000195643 622 ntBASIC18.33■□□□□ 0.53
Cux2P70298 AC134860.2-201ENSMUST00000225277 1036 ntBASIC18.33■□□□□ 0.53
Cux2P70298 BX649293.1-201ENSMUST00000227437 631 ntBASIC18.33■□□□□ 0.53
Cux2P70298 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.33■□□□□ 0.53
Cux2P70298 AC158777.1-201ENSMUST00000226216 1724 ntBASIC18.33■□□□□ 0.53
Cux2P70298 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cux2P70298 Gm9544-201ENSMUST00000223349 2482 ntBASIC18.33■□□□□ 0.53
Cux2P70298 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cux2P70298 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC18.32■□□□□ 0.52
Cux2P70298 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cux2P70298 Gm5071-201ENSMUST00000104922 1035 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC18.32■□□□□ 0.52
Cux2P70298 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Gm25154-201ENSMUST00000157123 119 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cux2P70298 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms