Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Ybx1P62960 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm25053-201ENSMUST00000103982 133 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm25922-201ENSMUST00000104281 130 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm24791-201ENSMUST00000104284 131 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm15003-201ENSMUST00000118884 446 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm14497-201ENSMUST00000119537 580 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm16219-201ENSMUST00000120096 274 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm24679-201ENSMUST00000158762 111 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm20614-201ENSMUST00000177106 632 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm25053-202ENSMUST00000199731 132 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm44647-201ENSMUST00000207402 428 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Gm6390-201ENSMUST00000215034 589 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.71□□□□□ -0.53
Ybx1P62960 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.71□□□□□ -0.53
Ybx1P62960 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ybx1P62960 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.71□□□□□ -0.54
Ybx1P62960 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ybx1P62960 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Ybx1P62960 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ybx1P62960 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ybx1P62960 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.71□□□□□ -0.54
Ybx1P62960 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ybx1P62960 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Gm11500-201ENSMUST00000118237 601 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.7□□□□□ -0.54
Ybx1P62960 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Gm16030-201ENSMUST00000159098 603 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Gm37284-201ENSMUST00000193607 539 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 Gm5599-201ENSMUST00000209602 788 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.7□□□□□ -0.54
Ybx1P62960 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ybx1P62960 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ybx1P62960 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ybx1P62960 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Gm11578-201ENSMUST00000118530 459 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Gm15036-201ENSMUST00000118880 400 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Gm15197-201ENSMUST00000120526 478 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms