Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Eif3eP60229 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Eif3eP60229 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Eif3eP60229 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.76□□□□□ -0.53
Eif3eP60229 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.76□□□□□ -0.53
Eif3eP60229 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Eif3eP60229 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Eif3eP60229 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.76□□□□□ -0.53
Eif3eP60229 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.76□□□□□ -0.53
Eif3eP60229 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Eif3eP60229 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Eif3eP60229 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm8199-201ENSMUST00000121323 823 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.75□□□□□ -0.53
Eif3eP60229 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.75□□□□□ -0.53
Eif3eP60229 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm6108-201ENSMUST00000208365 367 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 Gm18212-201ENSMUST00000211678 889 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm6722-201ENSMUST00000221586 390 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Eif3eP60229 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Eif3eP60229 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.75□□□□□ -0.53
Eif3eP60229 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Eif3eP60229 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Eif3eP60229 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Eif3eP60229 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.74□□□□□ -0.53
Eif3eP60229 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Eif3eP60229 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Eif3eP60229 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Eif3eP60229 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.74□□□□□ -0.53
Eif3eP60229 Gm15515-201ENSMUST00000117827 822 ntBASIC11.74□□□□□ -0.53
Eif3eP60229 Gm14017-201ENSMUST00000121934 386 ntBASIC11.74□□□□□ -0.53
Eif3eP60229 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.74□□□□□ -0.53
Eif3eP60229 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms