Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Tpm1P58771 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.71□□□□□ -0.37
Tpm1P58771 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.71□□□□□ -0.37
Tpm1P58771 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.71□□□□□ -0.37
Tpm1P58771 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.71□□□□□ -0.37
Tpm1P58771 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 Gm7046-201ENSMUST00000221351 977 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.71□□□□□ -0.37
Tpm1P58771 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tpm1P58771 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Tpm1P58771 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tpm1P58771 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tpm1P58771 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tpm1P58771 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.71□□□□□ -0.38
Tpm1P58771 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tpm1P58771 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tpm1P58771 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.7□□□□□ -0.38
Tpm1P58771 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tpm1P58771 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.7□□□□□ -0.38
Tpm1P58771 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Tpm1P58771 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tpm1P58771 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.7□□□□□ -0.38
Tpm1P58771 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tpm1P58771 Gm3096-201ENSMUST00000185770 364 ntBASIC12.7□□□□□ -0.38
Tpm1P58771 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tpm1P58771 Gm8712-201ENSMUST00000221090 701 ntBASIC12.7□□□□□ -0.38
Tpm1P58771 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tpm1P58771 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tpm1P58771 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Tpm1P58771 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.69□□□□□ -0.38
Tpm1P58771 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Tpm1P58771 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tpm1P58771 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tpm1P58771 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tpm1P58771 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Gm15004-201ENSMUST00000119192 630 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.69□□□□□ -0.38
Tpm1P58771 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.69□□□□□ -0.38
Tpm1P58771 Snora78-201ENSMUST00000158630 128 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.69□□□□□ -0.38
Tpm1P58771 Gm38002-201ENSMUST00000193255 180 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 Gm6439-201ENSMUST00000199849 862 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Tpm1P58771 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.69□□□□□ -0.38
Tpm1P58771 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Tpm1P58771 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Tpm1P58771 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tpm1P58771 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.69□□□□□ -0.38
Tpm1P58771 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms