Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rrp1P56183 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.86□□□□□ -0.35
Rrp1P56183 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm27627-201ENSMUST00000183644 150 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm26448-201ENSMUST00000082446 203 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.86□□□□□ -0.35
Rrp1P56183 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rrp1P56183 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.86□□□□□ -0.35
Rrp1P56183 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rrp1P56183 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.85□□□□□ -0.35
Rrp1P56183 Gm28686-201ENSMUST00000187404 609 ntBASIC12.85□□□□□ -0.35
Rrp1P56183 Gm38151-201ENSMUST00000195085 289 ntBASIC12.85□□□□□ -0.35
Rrp1P56183 Gm5714-201ENSMUST00000197343 566 ntBASIC12.85□□□□□ -0.35
Rrp1P56183 Gm9353-201ENSMUST00000200472 604 ntBASIC12.85□□□□□ -0.35
Rrp1P56183 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Gm270-201ENSMUST00000223010 976 ntBASIC12.85□□□□□ -0.35
Rrp1P56183 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rrp1P56183 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rrp1P56183 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rrp1P56183 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rrp1P56183 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Rrp1P56183 Gm13665-201ENSMUST00000120830 528 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms