Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.02□□□□□ -0.33
Psmc4P54775 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Psmc4P54775 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Psmc4P54775 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.01□□□□□ -0.33
Psmc4P54775 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Psmc4P54775 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Gm16219-201ENSMUST00000120096 274 ntBASIC13.01□□□□□ -0.33
Psmc4P54775 Gm15329-201ENSMUST00000121408 155 ntBASIC13.01□□□□□ -0.33
Psmc4P54775 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.01□□□□□ -0.33
Psmc4P54775 Gm12906-201ENSMUST00000154610 441 ntBASIC13.01□□□□□ -0.33
Psmc4P54775 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.01□□□□□ -0.33
Psmc4P54775 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Psmc4P54775 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.01□□□□□ -0.33
Psmc4P54775 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Psmc4P54775 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13□□□□□ -0.33
Psmc4P54775 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Psmc4P54775 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13□□□□□ -0.33
Psmc4P54775 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13□□□□□ -0.33
Psmc4P54775 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13□□□□□ -0.33
Psmc4P54775 Gm9162-201ENSMUST00000182081 991 ntBASIC13□□□□□ -0.33
Psmc4P54775 Gm34379-201ENSMUST00000195036 290 ntBASIC13□□□□□ -0.33
Psmc4P54775 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
Psmc4P54775 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13□□□□□ -0.33
Psmc4P54775 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Psmc4P54775 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Psmc4P54775 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Psmc4P54775 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Psmc4P54775 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Psmc4P54775 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Psmc4P54775 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Psmc4P54775 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.99□□□□□ -0.33
Psmc4P54775 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.99□□□□□ -0.33
Psmc4P54775 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms