Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11□□□□□ -0.65
Sox3P53784 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11□□□□□ -0.65
Sox3P53784 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11□□□□□ -0.65
Sox3P53784 Gm4034-201ENSMUST00000187674 480 ntBASIC11□□□□□ -0.65
Sox3P53784 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11□□□□□ -0.65
Sox3P53784 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox3P53784 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11□□□□□ -0.65
Sox3P53784 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11□□□□□ -0.65
Sox3P53784 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11□□□□□ -0.65
Sox3P53784 CT485606.1-201ENSMUST00000213187 878 ntBASIC11□□□□□ -0.65
Sox3P53784 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11□□□□□ -0.65
Sox3P53784 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox3P53784 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11□□□□□ -0.65
Sox3P53784 Gm15991-202ENSMUST00000212123 3565 ntBASIC11□□□□□ -0.65
Sox3P53784 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Sox3P53784 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sox3P53784 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox3P53784 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gm5434-202ENSMUST00000222384 1451 ntBASIC11□□□□□ -0.65
Sox3P53784 Gm5434-201ENSMUST00000071825 1451 ntBASIC11□□□□□ -0.65
Sox3P53784 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox3P53784 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm22920-201ENSMUST00000102175 109 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm14193-201ENSMUST00000105067 153 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm11663-201ENSMUST00000117888 290 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm15566-201ENSMUST00000121130 590 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Gm15744-201ENSMUST00000161734 213 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Gm4654-201ENSMUST00000183305 982 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm3551-201ENSMUST00000190750 664 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox3P53784 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.99□□□□□ -0.65
Sox3P53784 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.99□□□□□ -0.65
Sox3P53784 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Gm4604-201ENSMUST00000025040 390 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox3P53784 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.99□□□□□ -0.65
Sox3P53784 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.99□□□□□ -0.65
Sox3P53784 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox3P53784 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox3P53784 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms