Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gm8420-201ENSMUST00000097103 598 ntBASIC11.71□□□□□ -0.53
TubP50586 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.71□□□□□ -0.53
TubP50586 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
TubP50586 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TubP50586 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.71□□□□□ -0.54
TubP50586 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.71□□□□□ -0.54
TubP50586 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TubP50586 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TubP50586 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.71□□□□□ -0.54
TubP50586 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
TubP50586 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TubP50586 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TubP50586 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TubP50586 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.7□□□□□ -0.54
TubP50586 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Gm4294-201ENSMUST00000105169 614 ntBASIC11.7□□□□□ -0.54
TubP50586 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Gm16166-201ENSMUST00000118291 787 ntBASIC11.7□□□□□ -0.54
TubP50586 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
TubP50586 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.7□□□□□ -0.54
TubP50586 Gm17391-201ENSMUST00000171036 126 ntBASIC11.7□□□□□ -0.54
TubP50586 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TubP50586 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.7□□□□□ -0.54
TubP50586 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.7□□□□□ -0.54
TubP50586 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.7□□□□□ -0.54
TubP50586 Gm45856-201ENSMUST00000212752 416 ntBASIC11.7□□□□□ -0.54
TubP50586 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.7□□□□□ -0.54
TubP50586 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.7□□□□□ -0.54
TubP50586 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TubP50586 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TubP50586 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.7□□□□□ -0.54
TubP50586 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.7□□□□□ -0.54
TubP50586 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.7□□□□□ -0.54
TubP50586 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.7□□□□□ -0.54
TubP50586 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TubP50586 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.69□□□□□ -0.54
TubP50586 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TubP50586 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.69□□□□□ -0.54
TubP50586 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.69□□□□□ -0.54
TubP50586 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Gm23272-201ENSMUST00000104053 129 ntBASIC11.69□□□□□ -0.54
TubP50586 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
TubP50586 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.69□□□□□ -0.54
TubP50586 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.69□□□□□ -0.54
TubP50586 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.69□□□□□ -0.54
TubP50586 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.69□□□□□ -0.54
TubP50586 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TubP50586 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TubP50586 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.69□□□□□ -0.54
TubP50586 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.69□□□□□ -0.54
TubP50586 Gm9645-201ENSMUST00000197131 792 ntBASIC11.69□□□□□ -0.54
TubP50586 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.69□□□□□ -0.54
TubP50586 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms