Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Gm10807-201ENSMUST00000177134 795 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Gm28450-201ENSMUST00000187349 638 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 Gm37666-201ENSMUST00000194110 866 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 Gm45113-201ENSMUST00000207518 165 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Gm8385-201ENSMUST00000058999 643 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Vps4bP46467 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.6□□□□□ -0.55
Vps4bP46467 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps4bP46467 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.59□□□□□ -0.55
Vps4bP46467 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Vps4bP46467 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 BC043934-202ENSMUST00000185694 2356 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Gm14724-201ENSMUST00000118400 537 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Gm15711-201ENSMUST00000118889 535 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Gm5714-201ENSMUST00000197343 566 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.59□□□□□ -0.55
Vps4bP46467 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Vps4bP46467 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.59□□□□□ -0.55
Vps4bP46467 Gm4978-201ENSMUST00000071565 801 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.59□□□□□ -0.55
Vps4bP46467 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps4bP46467 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.59□□□□□ -0.55
Vps4bP46467 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.59□□□□□ -0.55
Vps4bP46467 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vps4bP46467 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vps4bP46467 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vps4bP46467 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vps4bP46467 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Gm8566-201ENSMUST00000120174 465 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Gm24749-201ENSMUST00000157838 343 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Gm2965-201ENSMUST00000198365 343 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Gm44262-201ENSMUST00000204969 372 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.58□□□□□ -0.56
Vps4bP46467 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Vps4bP46467 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms