Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm43811-201ENSMUST00000202862 695 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Wbp1-209ENSMUST00000205023 716 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm13192-201ENSMUST00000101199 208 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm10443-201ENSMUST00000119024 210 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm11952-201ENSMUST00000121172 821 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm24312-201ENSMUST00000178677 119 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm20568-201ENSMUST00000197129 208 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm43866-201ENSMUST00000203894 839 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm44008-201ENSMUST00000204345 412 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.74□□□□□ -0.53
Cxcl12P40224 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.74□□□□□ -0.53
Cxcl12P40224 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.74□□□□□ -0.53
Cxcl12P40224 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cxcl12P40224 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl12P40224 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms