Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm44126-201ENSMUST00000204831 514 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.42□□□□□ -0.9
Timp3P39876 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Timp3P39876 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Gm15573-201ENSMUST00000119487 540 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Gm11246-201ENSMUST00000120880 345 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Gm12208-201ENSMUST00000122004 163 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Gm6450-201ENSMUST00000200896 574 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Gm43852-201ENSMUST00000202098 917 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Gm45219-201ENSMUST00000205602 465 ntBASIC9.41□□□□□ -0.9
Timp3P39876 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.41□□□□□ -0.9
Timp3P39876 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.41□□□□□ -0.9
Timp3P39876 Gm6867-201ENSMUST00000219165 425 ntBASIC9.41□□□□□ -0.9
Timp3P39876 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Timp3P39876 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Timp3P39876 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Timp3P39876 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.41□□□□□ -0.9
Timp3P39876 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Timp3P39876 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Timp3P39876 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Timp3P39876 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Timp3P39876 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms