Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh4P39038 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm12247-201ENSMUST00000117585 670 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm23045-201ENSMUST00000175041 96 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Gm43002-201ENSMUST00000200310 155 ntBASIC10.96□□□□□ -0.65
Cdh4P39038 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdh4P39038 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cdh4P39038 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdh4P39038 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh4P39038 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdh4P39038 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh4P39038 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdh4P39038 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh4P39038 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh4P39038 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh4P39038 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh4P39038 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cdh4P39038 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Gm11836-201ENSMUST00000121022 441 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm15881-201ENSMUST00000148792 942 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cdh4P39038 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm20495-201ENSMUST00000173902 235 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Gm18367-201ENSMUST00000176139 600 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Gm7741-201ENSMUST00000181445 989 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Gm4654-201ENSMUST00000183305 982 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm43186-201ENSMUST00000198130 824 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh4P39038 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Lect2-202ENSMUST00000225183 823 ntBASIC10.95□□□□□ -0.66
Cdh4P39038 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh4P39038 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh4P39038 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh4P39038 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh4P39038 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms