Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.46□□□□□ -0.42
Sox5P35710 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.46□□□□□ -0.42
Sox5P35710 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.46□□□□□ -0.42
Sox5P35710 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Sox5P35710 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox5P35710 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox5P35710 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm22323-201ENSMUST00000103832 109 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sox5P35710 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sox5P35710 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sox5P35710 Gm12857-201ENSMUST00000117678 592 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm13996-201ENSMUST00000118456 430 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox5P35710 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox5P35710 Gm3332-201ENSMUST00000189337 928 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Gm38151-201ENSMUST00000195085 289 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Gm5714-201ENSMUST00000197343 566 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Gm43758-201ENSMUST00000199500 367 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox5P35710 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sox5P35710 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox5P35710 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.45□□□□□ -0.42
Sox5P35710 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.45□□□□□ -0.42
Sox5P35710 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox5P35710 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.44□□□□□ -0.42
Sox5P35710 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox5P35710 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Sox5P35710 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.44□□□□□ -0.42
Sox5P35710 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Sox5P35710 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Sox5P35710 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.44□□□□□ -0.42
Sox5P35710 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.44□□□□□ -0.42
Sox5P35710 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sox5P35710 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Sox5P35710 Mir7677-201ENSMUST00000184226 67 ntBASIC12.44□□□□□ -0.42
Sox5P35710 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox5P35710 Gm18038-201ENSMUST00000197900 485 ntBASIC12.44□□□□□ -0.42
Sox5P35710 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox5P35710 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.44□□□□□ -0.42
Sox5P35710 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox5P35710 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.44□□□□□ -0.42
Sox5P35710 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox5P35710 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms