Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.01□□□□□ -0.97
Rom1P32958 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.01□□□□□ -0.97
Rom1P32958 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rom1P32958 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.01□□□□□ -0.97
Rom1P32958 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Gm14928-201ENSMUST00000120198 477 ntBASIC9.01□□□□□ -0.97
Rom1P32958 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.01□□□□□ -0.97
Rom1P32958 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.01□□□□□ -0.97
Rom1P32958 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.01□□□□□ -0.97
Rom1P32958 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 Gm25261-201ENSMUST00000157416 134 ntBASIC9.01□□□□□ -0.97
Rom1P32958 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Rom1P32958 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Gm37301-201ENSMUST00000195412 568 ntBASIC9.01□□□□□ -0.97
Rom1P32958 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.01□□□□□ -0.97
Rom1P32958 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.01□□□□□ -0.97
Rom1P32958 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Rom1P32958 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Rom1P32958 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9□□□□□ -0.97
Rom1P32958 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9□□□□□ -0.97
Rom1P32958 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9□□□□□ -0.97
Rom1P32958 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9□□□□□ -0.97
Rom1P32958 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9□□□□□ -0.97
Rom1P32958 Gm24074-201ENSMUST00000158178 260 ntBASIC9□□□□□ -0.97
Rom1P32958 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9□□□□□ -0.97
Rom1P32958 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Gm38230-201ENSMUST00000193572 1159 ntBASIC9□□□□□ -0.97
Rom1P32958 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Gm4607-201ENSMUST00000206649 577 ntBASIC9□□□□□ -0.97
Rom1P32958 Gm40466-201ENSMUST00000212174 422 ntBASIC9□□□□□ -0.97
Rom1P32958 Gm6653-201ENSMUST00000218063 1288 ntBASIC9□□□□□ -0.97
Rom1P32958 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rom1P32958 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rom1P32958 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rom1P32958 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rom1P32958 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms