Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm15610-201ENSMUST00000120584 195 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm8738-201ENSMUST00000172606 329 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm2991-201ENSMUST00000173338 480 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Mir8109-201ENSMUST00000184375 117 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.84□□□□□ -0.83
Slc6a1P31648 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Slc6a1P31648 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Slc6a1P31648 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Slc6a1P31648 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Slc6a1P31648 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm12502-201ENSMUST00000120197 444 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm14726-201ENSMUST00000120623 896 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm26083-201ENSMUST00000157904 193 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.83□□□□□ -0.84
Slc6a1P31648 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm38158-201ENSMUST00000194617 339 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.83□□□□□ -0.84
Slc6a1P31648 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.83□□□□□ -0.84
Slc6a1P31648 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Slc6a1P31648 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.82□□□□□ -0.84
Slc6a1P31648 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms